PORTFELJ / Doc. dr. sc. Daniela Kalafatović

Portfelj

Doc. dr. sc.

Daniela Kalafatović

Fakultet biotehnologije i razvoja lijekova

Zavod za molekularnu i sistemsku biomedicinu

Kontakt

T 584-588

UNIRI e-mail

PROSTORIJA O-810

Vidljivost

Obrazovanje

2004 – 2010

Mag. Farm.

Sveučilišni studij Farmacije, smjer farmaceutska kemija i tehnologija

Sveučilište u Trstu

2011 – 2014

Doktorat znanosti

WestChem, Pure and Applied Chemistry

University of Strathclyde

Radno iskustvo

01.02.2021. -

Predstojnik zavoda za medicinsku kemiju

Sveučilište u Rijeci, Odjel za biotehnologiju

01.08.2019. -

Docent

Sveučilište u Rijeci, Odjel za Biotehnologiju

09.03.2016. - 31.03.2018.

Poslijedoktorand (eng. Post-doctoral fellow, Marie-Curie COFUND)

Glavni projekt: "Combinatorial peptide libraries for metastatic breast cancer therapy". Znanstvena istraživanja u multidisciplinarnom području medicinske kemije (Chemistry and molecular pharmacology program) i onkologije (Oncology program), suradnja sa Hospital Clinic Barcelona u području antimikrobnih peptida za tretman rezistentnih bakterija, mentorstvo studentu (Laura López Ruiz) zavrsne godine preddiplomskog studija u području medicinske kemije peptida za terapiju rijetke bolesti Friedreich ataxie, u suradnji sa Universidad Autonoma de Madrid, sudjelovanje u programu popularizacije znanosti (Crazy about Biomedicine program, 2017), sudjelovanje u radionicama o poduzetništvu i sastancima IRB Barcelona Innovation tima s ciljem pronalaska poslovnih ideja i kreacije poslovnih planova za potencijalne start-up kompanije.

Institute for Research in Biomedicine (IRB), Barcelona, Španjolska

01.02.2015. - 01.02.2016.

Znanstveni suradnik (eng. Research Associate)

Glavni projekt: "Self-assembled nanomaterials for selective cancer targeting". Znanstvena istraživanja u interdisciplinarnom području supramolekularne kemije i nanotehnologije peptida (peptide self-assembly), postavljanje laboratorija i sudjelovanje u opsežnim treninzima novih članova grupe, uključujući doktorande i post-doktorande. Vođenje postrojenja za sintezu peptida (eng. Peptide synthesis facility). Suradnja pri organizaciji jednodnevnih simpozija i konferencija, za izdvojiti je dobiveno sponzorstvo tvrtke CEM za događaj "Soft Nano" održan u ASRC-u.

Nanoscience initiative, Advanced Science Research Centre (ASRC) at The Graduate Center of the City University of New York, SAD

10.01.2011. - 30.06.2014.

Znanstveni novak (eng. PhD student)

Glavni projekt: "Enzyme responsive nanomaterials for cancer applications". Znanstvena istraživanja u interdisciplinarnom području supramolekularne kemije i nanotehnologije peptida (peptide self-assembly). Ko-mentorstvo gostujuće studentice (Rachel Kane) u okviru programa popularizacije znanosti «Nuffield Research Placements»; sudjelovanje u organizaciji međunarodnih skupova, prezentiranje na međunarodnim konferencijama.

WestCHEM, Department of Pure & Applied Chemistry, University of Strathclyde, Glasgow

Nagrade i priznanja

02.05.2023.

Invited Lecturer Presentation Award (MRS 2023 Spring Meeting and Exhibit, SB06 Peptide and Protein-Based Materials)

2015.

NAGRADA za najbolji poster na međunarodnoj znanstvenoj konferenciji Nanoscience NY Conference 2015 (2015., New York, SAD); https://nanoscienceny.com/nanoscience/index.htm

2013.

Domino Macro Group Young Researcher 2013 za drugo najbolje usmeno izlaganje na međunarodnoj znanstvenoj konferenciji Macro Group Young Researchers Meeting (2013., Nottingham, UK)

Članstva

2023.

American Peptide Society

2023.

Materials Research Society

2021.

European Peptide Society

2021.

Royal Society of Chemistry

2011 - 2015

Royal Society of Chemistry

Nastavna djelatnost

Kolegiji

2024. -

Keminformatika

Preddiplomski studij "Biotehnologija i istraživanje lijekova"

Sveučilište u Rijeci, Fakultet biotehnologije i razvoja lijekova

Nositelj kolegija

2021. -

Research Proposal & Poster Presentation

Biotechnology for the Life Sciences (Optilife)

Sveučilište u Rijeci, Odjel za Biotehnologiju

Nositelj kolegija

2020. -

Nanochemistry

Biotechnology for the Life Sciences (Optilife)

Sveučilište u Rijeci, Odjel za biotehnologiju

Nositelj kolegija

2019. -

Instrumetalne metode kemijske analize

Diplomski sveučilišni studij "Medicinska kemija"

Sveučilište u Rijeci, Odjel za Biotehnologiju

Nositelj kolegija

Mentor u završnim radovima

30.10.2023.

Exploring Strategies to Discover and Enhance Catalytic Activity in Short Peptides

David Ruben Quenedit Peralta Reis

ITQB, Lisbon (Erasmus student)

ITQB NOVA, Lisbon, Portugal

26.10.2023.

The effects of extracts of non-fermented and fermented Japanese knotweed (Fallopia japonica) on oxidation levels in the yeast Saccharomyces cerevisiae

Laura Sundać

Medicinska kemija

Sveučilište u Rijeci, Odjel za Biotehnologiju

19.12.2022.

Razvoj Raman spektroskopije kao neinvazivne metode za inprocesnu kontrolu u farmaceutskoj industriji

Željko Agić

Biotehnologija u medicini

Sveučilište u Rijeci, Odjel za Biotehnologiju

19.09.2022.

Design of linear and cyclic catalytic peptides

Sabino Sepčić

Medicinska kemija

Sveučilište u Rijeci, Odjel za Biotehnologiju

08.09.2022.

Solid phase peptide synthesis

Sara Moržan

Preddiplomski sveučilišni studij "Biotehnologija i istraživanje lijekova"

Sveučilište u Rijeci, Odjel za Biotehnologiju

27.07.2022.

Development of novel protocols for polyethylene terephthalate and polystyrene isolation from seawater samples and their identification using ATR-FTIR and MALDI-MS

Erika Radović

Medicinska kemija

Sveučilište u Rijeci, Odjel za Biotehnologiju

18.07.2022.

Uvođenje i validacija Raman tehnike za identifikaciju ulazne supstancije

Isidora Kajzogaj

Biotehnologija u medicini

Sveučilište u Rijeci, Odjel za Biotehnologiju

29.09.2021.

Evaluation of active sites of enzymes and their comparison to catalytically active peptides involved in ester hydrolysis

Marko Babić

Diplomski sveučilišni studij "Istraživanje i razvoj lijekova"

Sveučilište u Rijeci, Odjel za Biotehnologiju

15.09.2021.

Design strategies for SARS-CoV-2 spike protein mimetics based on peptide self-assembly

Katarina Budić

Diplomski sveučilišni studij "Biotehnologija u medicini"

Sveučilište u Rijeci, Odjel za Biotehnologiju

16.07.2021.

Razvoj LC-QQQ metode za analizu fenolnih komponenti i metoda za određivanje antioksidativnog potencijala u uzorcima meda

Sanja Poljak

Diplomski sveučilišni studij "Medicinska kemija"

Sveučilište u Rijeci, Odjel za Biotehnologiju

21.09.2020.

Application of Machine Learning in Peptide Design

Sabino Sepčić

Preddiplomski sveučilišni studij "Biotehnologija i istraživanje lijekova"

Sveučilište u Rijeci, Odjel za biotehnologiju

10.09.2020.

Design of catalytically active peptides and peptide nanostructures

Marija Kristina Josipović

Preddiplomski sveučilišni studij "Biotehnologija i istraživanje lijekova"

Sveučilište u Rijeci, Odjel za biotehnologiju

Znanstvena djelatnost

Znanstveni radovi

2024.

Amyloids, amorphous aggregates and assemblies of peptides–Assessing aggregation

M Juković, I Ratkaj, D Kalafatović, NJ Bradshaw

Biophysical Chemistry - 308

Q2

2023.

Factors influencing the catalytic activity of metal-dependent histidine-rich peptides: sequence, conformation, stereochemistry, self-assembly or their interplay?

P. Janković, M. Babić, M. Perčić, A. S. Pina, D. Kalafatovic

Molecular Systems Design & Engineering - 8 1371-1380

https://doi.org/10.1039/D3ME00117B

Q2 WOS Q2 WOS

2023.

Configurable soft computing-based generative model: The search for catalytic peptides

G. Mauša, M. Njirjak, E. Otović, D. Kalafatovic

MRS Advances - 1-7

https://link.springer.com/article/10.1557/s43580-023-00629-8

Q4

2023.

Neuroevolution for the Sustainable Evolution of Neural Networks

E Otović, J Lerga, D Kalafatovic, G Mauša

Proceeding of the 46th MIPRO ICT and Electronics Convention (MIPRO) - 1045-1051

https://ieeexplore.ieee.org/abstract/document/10159943

2023.

Manually curated dataset of catalytic peptides for ester hydrolysis

P Janković, E Otović, G Mauša, D Kalafatovic

Data in Brief - 48 1-6

https://www.sciencedirect.com/science/article/pii/S2352340923004092

Q3 WOS

2023

Antiviral Peptide-Based Conjugates: State of the Art and Future Perspectives

Todorovski, Toni; Kalafatovic, Daniela; Andreu, David;

Pharmaceutics - 15

https://doi.org/10.3390/pharmaceutics15020357

Q1 WOS Q1

2022.

Esterase Sequence Composition Patterns for the Identification of Catalytic Triad Microenvironment Motifs

Marko Babić, Patrizia Janković, Silvia Marchesan, Goran Mauša, Daniela Kalafatovic

Journal of Chemical Information and Modeling - 62 6398–6410

https://pubs.acs.org/doi/abs/10.1021/acs.jcim.2c00977

Q1 WOS Q1

2022.

Catalytic Peptides: the challenge between simplicity and functionality

Sara Carvalho, David Q. Peralta Reis, Sara V. Pereira, Daniela Kalafatovic, Ana Sofia Pina

Israel Journal of Chemistry

https://onlinelibrary.wiley.com/doi/abs/10.1002/ijch.202200029

Q3

2022.

Phenolic Composition and Antioxidant Activity of Mint (Mentha spp.) Honey

Tomislav Pavlešić, Sanja Poljak, Dijana Mišetić Ostojić, Ivana Lučin, Christian A. Reynolds, Daniela Kalafatović, Lara Saftić Martinović

Food technology and Biotechnology - 60

https://doi.org/10.17113/ftb.60.04.22.7521

Q3

2022.

Coastal water quality prediction based on machine learning with feature interpretation and spatio-temporal analysis

Luka Grbčić, Siniša Družeta, Goran Mauša, Tomislav Lipić, Darija Vukić Lušić, Marta Alvir, Ivana Lučin, Ante Sikirica, Davor Davidović, Vanja Travaš, Daniela Kalafatovic, Kristina Pikelj, Hana Fajković, Toni Holjević, Lado Kranjčević

Environmental Modelling & Software - Volume 155

https://doi.org/10.1016/j.envsoft.2022.105458

Q1

2022.

Sequential Properties Representation Scheme for Recurrent Neural Network-Based Prediction of Therapeutic Peptides

Erik Otović, Marko Njirjak, Daniela Kalafatovic, Goran Mauša

Journal of Chemical Information and Modeling - 62 2961-2972

https://doi.org/10.1021/acs.jcim.2c00526

Q1

2022.

Coupled encoding methods for antimicrobial peptide prediction: How sensitive is a highly accurate model?

Ivan Erjavac, Daniela Kalafatovic, Goran Mauša

Artificial Intelligence in the Life Sciences

https://doi.org/10.1016/j.ailsci.2022.100034

2022.

Discovery of phosphotyrosine-binding oligopeptide with supramolecular target selectivity

Ana Sofia Pina, Leonor Morgado, Krystyna Louise Duncan, Sara S Carvalho, Henrique F. Carvalho, Arménio J.M. Moura Barbosa, Beatriz de Pina Mariz, Inês P Moreira, Daniela Kalafatovic, Bruno Miguel Morais Faustino, Vishal Narang, Tong Wang, Charalampos Pappas, Isabel Ferreira, Ana C A Roque and Rein Ulijn

Chemical Science

https://doi.org/10.1039/D1SC04420F

Q1

2021.

Exploiting Peptide Self-Assembly for the Development of Minimalistic Viral Mimetics

Patrizia Janković, Iva Šantek, Ana Sofia Pina, Daniela Kalafatovic

Frontiers in Chemistry - 9 594

https://doi.org/10.3389/fchem.2021.723473

Q2

2020

Bottom-Up Design Approach for OBOC Peptide Libraries

Daniela Kalafatovic*, Goran Mauša, Dina Rešetar Maslov, Ernest Giralt

Molecules - 25 1-15

https://www.mdpi.com/1420-3049/25/15/3316

Q2

2019

Customizing Morphology, Size, and Response Kinetics of Matrix Metalloproteinase-Responsive Nanostructures by Systematic Peptide Design

Jiye Son, Daniela Kalafatovic, Mohit Kumar, Barney Yoo, Mike A Cornejo, María Contel, Rein V Ulijn

ACS nano - 13 1555-1562

https://pubs.acs.org/doi/abs/10.1021/acsnano.8b07401

Q1 Exc

2019

Algorithm-supported, mass and sequence diversity-oriented random peptide library design

Daniela Kalafatovic, Goran Mauša, Toni Todorovski, Ernest Giralt

Journal of cheminformatics - 11 25

https://jcheminf.biomedcentral.com/articles/10.1186/s13321-019-0347-6

Q1

2018

MSK1 regulates luminal cell differentiation and metastatic dormancy in ER+ breast cancer

Sylwia Gawrzak, Lorenzo Rinaldi, Sara Gregorio, Enrique J Arenas, Fernando Salvador, Jelena Urosevic, Cristina Figueras-Puig, Federico Rojo, Ivan del Barco Barrantes, Juan Miguel Cejalvo, Marta Palafox, Marc Guiu, Antonio Berenguer-Llergo, Aikaterini Symeonidi, Anna Bellmunt, Daniela Kalafatovic, Anna Arnal-Estape, Esther Fernandez, Barbara Müllauer, Rianne Groeneveld, Konstantin Slobodnyuk, Camille Stephan-Otto Attolini, Cristina Saura, Joaquin Arribas, Javier Cortes, Ana Rovira, Montse Munoz, Ana Lluch, Violeta Serra, Joan Albanell, Aleix Prat, Angel R Nebreda, Salvador Aznar Benitah, Roger R Gomis

Nature Cell Biology - 20 211

https://www.nature.com/articles/s41556-017-0021-z

Q1 Exc

2017.

Cell-penetrating peptides: Design strategies beyond primary structure and amphipathicity

Daniela Kalafatovic, Ernest Giralt

Molecules - 22 1929

https://www.mdpi.com/1420-3049/22/11/1929

Q2

2016.

MMP-9 triggered self-assembly of doxorubicin nanofiber depots halts tumor growth

Daniela Kalafatovic, Max Nobis, Jiye Son, Kurt I Anderson, Rein V Ulijn

Biomaterials - 98 192-202

https://www.sciencedirect.com/science/article/pii/S0142961216301582

Q1 Exc

2015.

Exploring the sequence space for (tri-) peptide self-assembly to design and discover new hydrogels

Pim WJM Frederix, Gary G Scott, Yousef M Abul-Haija, Daniela Kalafatovic, Charalampos G Pappas, Nadeem Javid, Neil T Hunt, Rein V Ulijn, Tell Tuttle

Nature chemistry - 7 30

https://www.nature.com/articles/nchem.2122

Q1 Exc

2015

Alignment of nanostructured tripeptide gels by directional ultrasonication

Charalampos G Pappas, Pim WJM Frederix, Tapiwa Mutasa, Scott Fleming, Yousef M Abul-Haija, Sharon M Kelly, Anthony Gachagan, Daniela Kalafatovic, Jacob Trevino, Rein V Ulijn, Shuo Bai

Chemical communications - 51 8465-8468

https://pubs.rsc.org/en/content/articlelanding/2015/CC/C5CC02049B#!divAbstract

Q1

2015

MMP-9 triggered micelle-to-fibre transitions for slow release of doxorubicin

B. R. Saunders and R. V. Ulijn D. Kalafatovic, M. Nobis, N. Javid, P. W. J. M. Frederix, K. I. Anderson

Biomaterials Science - 3 246-249

https://pubs.rsc.org/en/content/articlelanding/2015/BM/C4BM00297K#!divAbstract

Q1

Pozvana predavanja

13.04.2023.

Soft Computing Guided Discovery of Short Peptides and Peptide Assemblies

D. Kalafatovic

San Francisco, SAD (MRS Spring Meeting)

12.05.2022.

Design of short peptides and peptide assemblies aided by machine learning and genetic algorithms

Daniela Kalafatovic

CIQUS, Santiago de Compostela, Španjolska

https://www.usc.es/ciqus/en/eventos/lecture-design-short-peptides-and-peptide-assemblies-aided-machine-learning-and-genetic

26.11.2021.

Design of short peptides and peptide assemblies aided by machine learning and genetic algorithms

Daniela Kalafatovic

ITQB Lisabon, Portugal

https://www.itqb.unl.pt/events/seminar-with-daniela-kalafatovic

Kongresna priopćenja

05.12.2023.

Machine Learning assisted design of bioactive peptides and peptide assemblies

D. Kalafatović

Pozvano predavanje

12th Austrian Peptide Symposium Beč, Austrija

08.11.2023. - 10.11.2023.

Machine learning complements human intuition in the discovery of catalytic peptides

D. Kalafatović

Predavanje

60th Japanese Peptide Symposium Otsu, Japan

20.09.2023.

Integration of machine-learning and human intuition for the discovery of functional peptides

D. Kalafatovic

Predavanje

Peptide Chemistry Day Zagreb, Hrvatska

25.07.2023. - 27.07.2023.

Generative Machine Learning Models Applied to Peptide Self-Assembly,

G. Mauša, D. Kalafatovic

Poster

Peptide Self-Assembly 2023 Manchester, UK

24.06.2023. - 29.06.2023.

Soft computing guided discovery of active peptides

G. Mauša, M. Njirjak, E. Otović, L. Žužić, M. Babić, P. Janković, D. Kalafatovic

Flash talk i poster prezentacija

The 28th American Peptide Symposium Phoenix, Arizona, SAD

10.04.2023. - 14.04.2023.

Soft Computing Guided Discovery of Short Peptides and Peptide Assemblies

D. Kalafatovic

Pozvano predavanje

MRS Spring Meeting San Francisco San Francisco, SAD

01.12.2022.

Enzyme Sequence Composition Patterns for the Identification of Catalytic Triad Microenvironment Motifs

M. Babić, D. Kalafatovic

Poster

11th Austrian Peptide Symposium Beč, Austrija

01.12.2022.

Transfer Learning for Improved Peptide Activity Prediction on Small Dataset

E. Otović, D. Kalafatovic, G. Mauša

Poster

11th Austrian Peptide Symposium Beč, Austrija

01.12.2022.

Genetic algorithm-enhanced parallel chemical space exploration utilising multiple peptide libraries

M. Njirjak, D. Kalafatovic, G. Mauša

Poster

11th Austrian Peptide Symposium Beč, Austrija

01.12.2022.

Esterase-inspired short catalytic peptides with tunable activity

P. Jankovic, T. Todorovski, A.S. Pina, D. Kalafatovic

Poster

11th Austrian Peptide Symposium Beč, Austrija

30.10.2022. - 04.11.2022.

Esterase Sequence Composition Patters As Inspiration For The Design Of Short Catalytic Peptides

D. Kalafatovic, P. Janković, M. Babić, A. S. Pina, G. Mauša

Poster

Gordon Research Conference Chemistry and Biology of peptides Oxnard, Kalifornija, SAD

30.10.2022. - 04.11.2022.

Soft Computing for Constructive Peptide Design and Peptide Activity Prediction

G. Mauša, E. Otović, M. Njirjak, I. Erjavac, D. Kalafatovic

Poster

Gordon Research Conference Chemistry and Biology of peptides Oxnard, Kalifornija, SAD

27.10.2022. - 28.10.2022.

Enzyme Sequence Composition Patterns for the Identification of Catalytic Triad Microenvironment Motifs

M. Babić, D. Kalafatović

Poster

6th International PhD Conference – Digitalization in Science and Society Ljubljana, Slovenija

01.09.2022. - 02.09.2022.

Genetic Algorithm-enhanced Parallel Chemical Space Exploration Utilising Multiple Peptide Libraries

Marko Njirjak, Daniela Kalafatovic, Goran Mauša

Poster

5th RSC-BMCS / RSC-CICAG Artificial Intelligence in Chemistry Cambridge, UK

01.09.2022. - 02.09.2022.

Transfer Learning for Improved Peptide Activity Prediction on Small Dataset

Erik Otović, Daniela Kalafatovic, Goran Mauša

Poster

5th RSC-BMCS / RSC-CICAG Artificial Intelligence in Chemistry Cambridge, UK

28.08.2022. - 02.09.2022.

Multimerized linear and branched peptide-porphyrin conjugates with potential antiviral activity

Giuseppina Guida, P. Janković, D. Mendonça, D. Kalafatovic, A. Da Poian, M. Castanho, D. Andreu, T. Todorovski

Poster

36th European Peptide Symposium and 12th International Peptide Symposium Sitges (Barcelona), Španjolska

28.08.2022. - 02.09.2022.

Hydrolase-inspired design of short catalytic linear and cyclic peptides

Patrizia Janković, Toni Todorovski, Daniela Kalafatovic

Poster

36th European Peptide Symposium and 12th International Peptide Symposium Sitges (Barcelona), Španjolska

28.08.2022. - 02.09.2022.

Design of short peptides and peptide assemblies aided by machine learning

Daniela Kalafatovic

Predavanje

36th European Peptide Symposium and 12th International Peptide Symposium Sitges (Barcelona), Španjolska

16.06.2022. - 18.06.2022.

Design of short catalytic peptides inspired by hydrolases

Patrizia Janković, Toni Todorovski, Daniela Kalafatovic

Poster

17th Naples Workshohp on Bioactive Peptides Napulj, Italija

10.05.2022. - 13.05.2022.

Multiple alignment method for identification of catalytic microenvironments in enzymes

Marko Babić, Daniela Kalafatovic

Poster

European Rosettacon on protein structure prediction and design Warsaw, Poljska (online)

05.10.2021. - 08.10.2021.

Design of linear and cyclic peptides for ester hydrolysis

Sepčić, S., Janković, P. & Kalafatovic, D.

Poster

27th Croatian Meeting of Chemists and Chemical Engineers Veli Lošinj, Hrvatska

05.10.2021. - 08.10.2021.

Theoretical evaluation of enzyme active sites and catalytic peptides involved in ester hydrolysis

Babić, M., Mauša, G., Svedružić, Ž. & Kalafatovic, D.

Poster

27th Croatian Meeting of Chemists and Chemical Engineers Veli Lošinj, Hrvatska

28.09.2021. - 01.10.2021.

Esterase active site-inspired design of short catalytic peptides

Kalafatovic, D.

Poster

Designing functional biomolecular assemblies_ Beyond biology Bled, Slovenija (online)

06.09.2021. - 08.09.2021.

Application of soft computing in peptide design

Kalafatovic, D.

Predavanje

1st Women in Supramolecular Chemistry Workshop Cagliari, Italija

06.09.2021. - 08.09.2021.

Design of short catalytic sequences inspired by enzymatic active sites

Janković, P., Todorovski, T. & Kalafatovic, D.

Poster

1st Women in Supramolecular Chemistry Workshop Cagliari, Italija

07.07.2021. - 09.07.2021.

Minimalistic Peptide-based Virus Mimetics

Janković, P., Budić, K., Pina, A. & Kalafatovic, D.

Poster

Systems Chemistry Symposium Strasbourg, Francuska (online)

23.04.2018.

Antimicrobial activity evaluation of newly designed antimicrobial peptides against multidrug-resistant bacteria

J. Moreno Morales, D. Kalafatovic, C. Ballesté, E. Giralt, J. Vila Estape.

Poster

European Congress of Clinical Microbiology and Infectious Diseases Madrid, Španjolska

16.10.2017.

OBOC combinatorial peptide libraries for identification of targetable membrane proteins as bone metastasis mediators in breast cancer

Kalafatovic, Daniela; Llorente, Alicia; Teixido, Meritxell; Gomis, Roger; Giralt, Ernest

Poster

12th Australian Peptide Symposium Peppers Noosa Resort, Queensland, Australija

18.06.2015.

MMP-9 responsive peptides for tumor associated formation of doxorubicin releasing nanofibres

D. Kalafatovic, M. Nobis, K. I. Anderson and R. V. Ulijn

Poster

Soft Nano NY Advanced Science Research Center, City University, New York, NY, SAD

17.04.2015.

MMP-9 responsive peptides for tumor associated formation of doxorubicin releasing nanofibres

D. Kalafatovic, M. Nobis, Kurt I. Anderson and R. V. Ulijn

Predavanje

BioDesign MegaMeeting Center for Integrative Proteomics Research, Rutgers University, New Jersey, SAD

19.02.2015.

MMP-9 responsive peptides for tumor associated formation of doxorubicin releasing nanofibres

D. Kalafatovic, M. Nobis, K. I. Anderson and R. V. Ulijn

Poster

Nanoscience NY Advanced Science Research Center, City University, New York, NY, SAD

30.10.2013.

MMP-9 triggered reconfiguration of supramolecular peptide amphiphiles for controlled release

Kalafatovic, D.; Nobis, M; Anderson, K. I.; Ulijn, R.V.

Predavanje

Peptide Materials for Nanotechnology and Biomedicine (PepMat 2013) Sorrento, Italija

06.09.2013.

Enzymatic release of a model drug from peptide micelles

Kane, R.; Leckie, J.; Kalafatovic, D.; Garety, L.; Ulijn, R.V.

Poster

Nuffield Bursary Scheme for Schools & Colleges Scotland, Royal College of Physician Edinburgh, UK

25.06.2013.

MMP-9 triggered reconfiguration of supramolecular peptide systems

Kalafatovic, D.; Ulijn, R. V.

Predavanje

Macro Group Young Researchers Meeting Nottingham, UK

07.06.2012.

Enzyme responsive microgels

Kalafatovic, D.; Ulijn, R.V

Poster

University of Strathclyde Research Day 2012 Glasgow, UK

12.-14.3.2018.

OBOC combinatorial peptide libraries for identification of targetable membrane proteins as bone metastasis mediators in breast cancer

D. Kalafatovic, A. Llorente, M. Teixido, E. Giralt and R. Gomis

Poster

Barcelona BioMed Conference: Mechanisms of Metastasis Barcelona, Španjolska

15-17.11.2017.

Decision Support System for Combinatorial Peptide Libraries

Mauša, Goran; Kalafatovic, Daniela; Giralt, Ernest; Galinac Grbac, Tihana

Poster

ENABLE Symposium 2017 Barcelona, Španjolska

17-20.8.2014.

MMP-9 responsive peptides for tumor associated formation of doxorubicin releasing nanofibres

Kalafatovic, D.; Nobis, M.; Anderson, K. I.; Ulijn, R. V.

Poster

RSC Challenges in Nanoscience University of California San Diego (San Diego, USA)

16-17.12.2013.

MMP-9 triggered reconfiguration of supramolecular peptide amphiphiles

Kalafatovic, D; Nobis, M; and Ulijn, R. V.

Poster

Macrocyclic and Supramolecular Chemistry Meeting Glasgow, UK

12-13.6.2013.

Enzyme responsive materials for controlled release

Kalafatovic, D.; Ulijn, R. V

Poster

Directed Assembly of Functional Nanomaterials: Design, control and manufacture Glasgow, UK

4-5.9.2012.

Enzyme responsive microgels

Kalafatovic, D.; Saunders, B.R.; Ulijn, R. V.

Poster

RSC Polymeric and Self-Assembled Hydrogels London, UK

9-12.7.2012.

Enzyme responsive microgels

Kalafatovic, D.; Saunders, B.R.; Ulijn, R. V.

Poster

Macro Group UK International Conference on Polymer Synthesis and UKPCF International Conference on Polymer Colloids Warwick, UK

20-25.6. 2015.

MMP-9 responsive peptides for tumor associated formation of doxorubicin releasing nanofibres

Kalafatovic, D; Nobis, M; Anderson, K. I.; Ulijn, R. V.

Poster

American Peptide Symposium Orlando, Florida, USA

Uredništva časopisa

2022.

Pharmaceutics, Special Issue on “Application of Peptide-Drug-Conjugates in the Treatment of Cancer and Microbial Infections”

https://www.mdpi.com/journal/pharmaceutics/special_issues/peptide_drug

Recenzije

2022.

MDPI: Symmetry

2022.

Briefings in Bioinformatics

2022.

ERC Starting grant (remote evaluator)

2021.

MDPI: Biomolecules, Antibiotics, International Journal of Molecular Sciences (IJMS)

2021.

Nano Letters

2021.

ACS Applied Materials & Interfaces

Projekti

Znanstveni projekti

2022. - 2025.

Inženjerstvo okoliša- stud. pilot-program projektno orijentirane interdisciplinarne mikrokvalifikacije

Suradnik

Sveučilište u Rijeci

2022. - 2023.

Design of peptide assemblies with emerging functions

Voditelj

Sveučilište u Rijeci 23690.41 HRK

2021. - 2025.

Projekt razvoja karijera mladih istraživača-izobrazba novih doktora znanosti (DOK-2021-02-3496)

Mentor doktrorandu

HRZZ- DOK

01.11.2020. - 31.10.2021.

SARS-CoV-2 Supramolecular Mimetics for Discovery of Peptides That Induce Viral Entrapment

Voditelj

Sveučilište u Rijeci 50.000 HRK

18.03.2020. - 18.03.2023.

Računalni model strujanja, poplavljivanja i širenja onečišćenja u rijekama i obalnim morskim područjima

Član tima

Europski fond za regionalni razvoj (EFRR)

https://strukturnifondovi.hr/natjecaji/shema-za-jacanje-primijenjenih-istrazivanja-za-mjere-prilagodbe-klimatskih-promjena/

01.02.2020. - 31.01.2025.

Dizajn katalitički aktivnih peptida i peptidnih nanostruktura

Voditelj

HRZZ (UIP-2019-04-7999) 1,999,600.00

2020. - 2023.

Applying Machine Learning for the Discovery of Peptides with Catalytic Activity

Suradnik

Sveučilište u Rijeci (UNIRI-Plus)

2020. - 2021.

Strateška internacionalizacija diplomskih studija matematike i biotehnologije (Optilife)

Suradnik

EU Struktrurni projekt

08.03.2016. - 31.03.2018.

Marie-Curie COFUND (IRB Barcelona)

Post-doc (suradnik)

EU commission

Projekti u znanosti - Voditelj projekta

UNIRI PROJEKTI MLADIH ZNANSTVENIKA 2022
STIMULATIVNE POTPORE 2021
STIMULATIVNE POTPORE 2020
STIMULATIVNE POTPORE 2019