Doc. dr. sc. Marko Haramija

Odjel za biotehnologiju Zavod za molekularnu i sistemsku biomedicinu

e-pošta : mharamija@uniri.hr

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Nastavna djelatnost

Kolegiji

1.1.2015. - Osnove masene spektrometrije
Preddiplomski sveučilišni studij "Biotehnologija i istraživnaje lijekova"

voditelj
Norma sati: 50
1.1.2014. - Predklinička istraživanja u razvoju lijeka
Diplomski sveučilišni studiji "Biotehnologija u medicini", "Biotehnologija i istraživanje lijekova", "Medicinska kemija"
Odjel za biotehnologiju
suradnik
Norma sati: 22
1.1.2013. - 1.1.2013. OMICS metode u biotehnologiji
Diplomski sveučilišni studiji "Biotehnologija u medicini", "Biotehnologija i istraživanje lijekova"
Odjel za biotehnologiju
suradnik
Norma sati: 18.5
1.1.2013. - 1.1.2013. Osnove kromatografije biomolekula
Diplomski sveučilišni studiji "Biotehnologija u medicini", "Biotehnologija i istraživanje lijekova"
Odjel za biotehnologiju
suradnik
Norma sati: 20.5
1.1.2013. - Masena spektrometrija u biomedicini
Diplomski sveučilišni studiji "Biotehnologija u medicini", "Biotehnologija i istraživanje lijekova", "Medicinska kemija"
Odjel za biotehnologiju
voditelj
Norma sati: 45
1.1.2013. - Anorganska kemija
Preddiplomski sveučilišni studij Fizika, smjer Znanost o okolišu
Odjel za fiziku
voditelj
Norma sati: 55
1.1.2011. - Biokemija
Preddiplomski sveučilišni studij "Biotehnologija i istraživanje lijekova"
Odjel za biotehnologiju
suradnik
Norma sati: 75
1.1.2010. - Analitička kemija
Preddiplomski sveučilišni studij "Biotehnologija i istraživanje lijekova"
Odjel za biotehnologiju
suradnik
Norma sati: 115

Znanstvena i umjetnička djelatnost

Znanstveni radovi

1. Jovanović, Marko; Peter-Katalinić, Jasna;
Negative ion MALDI-TOF MS, ISD and PSD of neutral underivatized oligosaccharides without anionic dopant strategies, using 2,5-DHAP as a matrix
Journal of Mass Spectrometry 51 111-122 - 2016.

Q1

2. Jovanović, Marko; Tyldesley-Worster, Richard; Pohlentz, Gottfried; Peter-Katalinić, Jasna;
MALDI Q-TOF CID MS for Diagnostic Ion Screening of Human Milk Oligosaccharide Samples
International Journal of Molecular Sciences 15 6527-6543 - 2014.

Q1

3. Jovanović, Marko; Dynan, William S;
Terminal DNA structure and ATP influence binding parameters of the DNA-dependent protein kinase at an early step prior to DNA synapsis
Nucleic Acids Research 34 1112-1120 - 2006.

Q1

4. Lee, Kyung-Jong; Jovanović, Marko; Udayakumar, Durga; Bladen, Catherine L; Dynan, William S;
Identification of DNA-PKcs phosphorylation sites in XRCC4 and effects of mutations at these sites on DNA end joining in a cell-free system
DNA Repair 3 267-276 - 2004.

Q1

5. Hanisch, Franz-Georg; Jovanović, Marko; Peter-Katalinic, Jasna;
Glycoprotein identification and localization of O-glycosylation sites by mass spectrometric analysis of deglycosylated/alkylaminylated peptide fragments
Analytical Biochemistry 290 47-59 - 2001.

Q2

Znanstvene knjige

1. pisanje cijelog udžbenika
Marko Jovanović
Introduction to Mass Spectrometry of Biomolecules: Theory and Principles
"Introduction to Mass Spectrometry of Biomolecules: Theory and Principles", Nova Science Publishers, Inc., New York, in press Marko Jovanović Nova Science Publishers, Inc. New York - 2016. https://www.novapublishers.com/catalog/product_info.php?products_id=58287
2. pisanje cijelog udžbenika
Marko Jovanović
Introduction to Mass Spectrometry of Biomolecules: Problems and Practical Aspects
"Introduction to Mass Spectrometry of Biomolecules: Problems and Practical Aspects", Nova Science Publishers, Inc., New York, in press Marko Jovanović Nova Science Publishers, Inc., New York New York - 2016. https://www.novapublishers.com/catalog/product_info.php?products_id=58286
3. pisanje cjelokupnog teksta
Marko Jovanović
Advances in Medicine and Biology, Vol 94.
Advances and challenges in structural analysis of milk biomolecules using modern mass spectrometry techniques Bernhardt LV Nova Science Publishers, Inc. New York - 2016. https://www.novapublishers.com/catalog/product_info.php?products_id=56587
4. pisanje cjelokupnog teksta
Marko Jovanović, Jasna Peter-Katalinić
Advances in Medicine and Biology, Vol. 86
Advances and challenges in structural analysis of human milk oligosaccharides using modern mass spectrometry Bernhardt LV Nova Science Publishers, Inc. New York - 2015. https://www.novapublishers.com/catalog/product_info.php?products_id=55097

Pozvana predavanja

1. Jovanović, Marko; Svensson, Inge; Leffler, Hakon; Peter-Katalinić, Jasna
Interactions of intact human galectin-3 and its C-terminal fragment with oligosaccharides: an electrospray mass spectrometry study
2. Jovanovic, Marko; Willetts, Matthew; Tyldesley, Richard; Brown, Jeff; Peter-Katalinić, Jasna
Fragmentation of native and peracetylated oligosaccharides in PSD MALDI-TOF and CID MALDI Q-TOF MS

Kongresna priopćenja

1.
Marko Jovanović, Ulf Nilsson, Hakon Leffler, Jasna Peter-Katalinić;
Applicability of ESI MS for screening of galectin-3C affinity data for carbohydrates poster GLYCO 23 XXIII International Symposium on Glycoconjugates Split, Hrvatska - 1.1.2015.
2.
Marko Jovanović, Ulf Nilsson, Hakon Leffler, Jasna Peter-Katalinić;
Applicability of tandem MS experiments for study of galectin•carbohydrate non-covalent complexes poster GLYCO 23 XXIII International Symposium on Glycoconjugates Split, Hrvatska - 1.1.2015.
3.
Marko Jovanović, Jasna Peter-Katalinić;
Fragmentation patterns of oligosaccharides in MALDI MS based on ion mode selection and the nature of precursor ion poster GLYCO 23 XXIII International Symposium on Glycoconjugates Split, Hrvatska - 1.1.2015.
4.
Marko Jovanović
Novel bioinformatic tools needed for high-throughput data analysis and visualization of oligosaccharide MS/MS spectra poster GLYCO 23 XXIII International Symposium on Glycoconjugates Split, Hrvatska - 1.1.2015.
5.
Marko Jovanović, Franz-Georg Hanisch, Jasna Peter-Katalinić;
Applicability of MALDI MS for mapping and sequencing of oligosaccharides and glycoconjugates poster GLYCO 23 XXIII International Symposium on Glycoconjugates Split, Hrvatska - 1.1.2015.
6.
Jovanović, Marko; Gumbarević, Darko; Giacometti, Jasminka;
Comparison of polyphenol content and antioxidative properties of fresh and processed Asparagus officinalis l. poster 8th International Congress of Food Technologists, Biotechnologists and Nutritionists Opatija, Croatia - 1.1.2014.
7.
Markovinović, Andrea; Jovanović, Marko; Gumbarević, Darko; Giacometti, Jasminka;
Fractionation and characterization of major bovine and goat whey proteins poster Congress of the Croatian Society of Biochemistry and Molecular Biology - HDBMB 2014 Zadar, Hrvatska - 1.1.2014.
8.
Jovanović, Marko; Tyldesley-Worster, Richard; Pohlentz, Gottfried; Peter-Katalinić, Jasna;
Non-biosynthetic human milk oligosaccharides - natural components or artefatcs? poster Congress of the Croatian Society of Biochemistry and Molecular Biology - HDBMB 2014 Zadar, Hrvatska - 1.1.2014.
9.
Milovanović, Sanja; Bubonja Šonje, Marina; Jovanović, Marko; Abram, Maja; Jurčić Momčilović, Dijana; Giacometti, Jasminka;
Antioxidant and antimicrobial properties of the extracts from plant leaves as a potential rich sources of bioactive phenolics poster Congress of the Croatian Society of Biochemistry and Molecular Biology - HDBMB 2014 Zadar, Hrvatska - 1.1.2014.
10.
Jovanović, Marko; Gumbarević, Darko; Giacometti, Jasminka;
Comparison of polyphenol content and antioxidative properties of fresh and processed domestic rhubarb poster 8th International Congress of Food Technologists, Biotechnologists and Nutritionists Opatija, Croatia - 1.1.2014.
11.
Beckedorf, Anke I.; Jovanović, Marko; Fischer, Werner; Schaeffer, Christina; Messner, Paul; Peter-Katalinić, Jasna
Screening of bacterial lipid libraries by MALDI-TOF PSD and MALDI-QTOF CID poster 50th ASMS Conference on Mass Spectrometry and Allied Topics Orlando, SAD - 1.1.2002.
12.
Jovanović, Marko; Ocelić, Nenad; Peter-Katalinić, Jasna
Bioinformatics-assisted survey of branching patterns in complex oligosaccharide mixtures poster 50th ASMS Conference on Mass Spectrometry and Allied Topics Orlando, SAD - 1.1.2002.
13.
Matis, Maja; Jovanović, Marko; Mormann, Michael; Žakelj-Mavrič, Marija; Peter-Katalinić, Jasna
De novo sequencing of Pleuroteus ostreatus proteins by use of isotopic lageling in combination with tandem mass spectrometry poster 35th Annual Meeting of the German Society for Mass Spectrometry Heidelberg, Njemačka - 1.1.2002.
14.
Jovanović, Marko; Metelmann, Wolfgang; Müthing, Johannes; Peter-Katalinić, Jasna
Comparative Ionization Patterns of Complex Ganglioside Mixtures in MALDI and ESI MS poster 34th Annual Meeting of the German Society for Mass Spectrometry Muenchen - 1.1.2001.
15.
Jovanović, Marko; Koenig, Simone; Peter-Katalinic, Jasna
Applicability of MALDI-PSD in Negative Mode for Analysis of Oligosaccharides, N-Glycans and O-Glycosylated Amino Acids poster 48th ASMS Conference on Mass Spectrometry and Allied Topics Long Beach, SAD - 1.1.2000.
16.
Jovanović, Marko; Paulsen, Hans; Peter-Katalinić, Jasna; Hanisch, Franz-Georg
Sequencing of De-O-glycosylated Alkylaminylated Peptides by nanoElectrospray Q-TOF Mass Spectrometry Poster 112th Joint Meeting on Glycobiology (of the studiengruppe Glykobiologie der Gesellschaft fuer Biochemie und Molekularbiologie", the "Nederlandse Vereniging voor Glycobiologie" and the "Groupe Lillois de Glycobiologie") Lille, Francuska - 1.1.2000.

Znanstveni projekti

1. 1.1.2014. -
Potencijalna primjena kakao polifenola u inhibiciji fibroze jetre: nastavak istraživanja primjene polifenola; suradnik - istraživač; Sveučilište u Rijeci; 44 000 Kn / god; https://portal.uniri.hr/project/FoPP
2. 1.1.2012. - 1.1.2014.
"Visokoprotočne analitičke platforme za kontrolu kvalitete i provjeru izvornosti hrane iz jadranskog područja"; suradnik - istraživač; HRZZ; ; http://www.adriafood.uniri.hr/hr/
3. 1.1.2012. - 1.1.2013.
335 - Potencijalna primjena kakao polifenola u inhibiciji fibroze jetre, voditelj Prof. Jasminka Giacometti; suradnik - istraživač; MZOS; 40.000 Kn godišnje;
4. 1.1.2003. - 1.1.2006.
Regulation of DNA double-strand break repair, voditelj Prof. William S. Dynan; graduate research assistant; NCI (National Cancer Institute), SAD; 263.000 USD godišnje;
5. 1.1.1999. - 1.1.2001.
Molekulare Analyse ZP6 zur Beschaffung eines MALDI-TOF Massenspektrometers , voditelj Prof. Jasna Peter-Katalinić; suradnik - istraživač; IZKF (Interdisziplinäres Zentrum für Klinische Forschung der Universität Münster); 35.000 EUR godišnje;

Recenzije

1. 2016. Časopis: Analyst
2. 2015. Časopis: Analyst